Last updated on 2025-07-26 13:50:40 CEST.
| Package | ERROR | NOTE | OK |
|---|---|---|---|
| broom | 6 | 7 | |
| chores | 13 | ||
| forested | 13 | ||
| gander | 13 | ||
| infer | 13 | ||
| mcptools | 11 | ||
| shinymodels | 13 | ||
| stacks | 13 | ||
| streamy | 13 | ||
| syrup | 13 | ||
| vitals | 3 | 10 | |
| workflows | 13 |
Current CRAN status: ERROR: 6, OK: 7
Version: 1.0.8
Check: examples
Result: ERROR
Running examples in ‘broom-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: tidy.epi.2by2
> ### Title: Tidy a(n) epi.2by2 object
> ### Aliases: tidy.epi.2by2 epiR_tidiers
>
> ### ** Examples
>
> ## Don't show:
> if (rlang::is_installed("epiR")) (if (getRversion() >= "3.4") withAutoprint else force)({ # examplesIf
+ ## End(Don't show)
+
+ # load libraries for models and data
+ library(epiR)
+
+ # generate data
+ dat <- matrix(c(13, 2163, 5, 3349), nrow = 2, byrow = TRUE)
+
+ rownames(dat) <- c("DF+", "DF-")
+ colnames(dat) <- c("FUS+", "FUS-")
+
+ # fit model
+ fit <- epi.2by2(
+ dat = as.table(dat), method = "cross.sectional",
+ conf.level = 0.95, units = 100, outcome = "as.columns"
+ )
+
+ # summarize model fit with tidiers
+ tidy(fit, parameters = "moa")
+ tidy(fit, parameters = "stat")
+ ## Don't show:
+ }) # examplesIf
> library(epiR)
Loading required package: survival
Package epiR 2.0.85 is loaded
Type help(epi.about) for summary information
Type browseVignettes(package = 'epiR') to learn how to use epiR for applied epidemiological analyses
> dat <- matrix(c(13, 2163, 5, 3349), nrow = 2, byrow = TRUE)
> rownames(dat) <- c("DF+", "DF-")
> colnames(dat) <- c("FUS+", "FUS-")
> fit <- epi.2by2(dat = as.table(dat), method = "cross.sectional", conf.level = 0.95,
+ units = 100, outcome = "as.columns")
> tidy(fit, parameters = "moa")
Error in `dplyr::bind_rows()`:
! Can't combine `PR.strata.wald$test.statistic` <double> and `chi2.strata.fisher$test.statistic` <character>.
Backtrace:
▆
1. ├─(if (getRversion() >= "3.4") withAutoprint else force)(...)
2. │ └─base::source(...)
3. │ ├─base::withVisible(eval(ei, envir))
4. │ └─base::eval(ei, envir)
5. │ └─base::eval(ei, envir)
6. ├─generics::tidy(fit, parameters = "moa")
7. ├─broom:::tidy.epi.2by2(fit, parameters = "moa")
8. │ └─dplyr::bind_rows(massoc[names(massoc) != "chi2.correction"], .id = "term")
9. │ └─vctrs::vec_rbind(!!!dots, .names_to = .id, .error_call = current_env())
10. └─vctrs (local) `<fn>`()
11. └─vctrs::vec_default_ptype2(...)
12. ├─base::withRestarts(...)
13. │ └─base (local) withOneRestart(expr, restarts[[1L]])
14. │ └─base (local) doWithOneRestart(return(expr), restart)
15. └─vctrs::stop_incompatible_type(...)
16. └─vctrs:::stop_incompatible(...)
17. └─vctrs:::stop_vctrs(...)
18. └─rlang::abort(message, class = c(class, "vctrs_error"), ..., call = call)
Execution halted
Examples with CPU (user + system) or elapsed time > 5s
user system elapsed
augment.poLCA 4.161 0.086 5.006
Flavor: r-devel-linux-x86_64-debian-clang
Version: 1.0.8
Check: examples
Result: ERROR
Running examples in ‘broom-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: tidy.epi.2by2
> ### Title: Tidy a(n) epi.2by2 object
> ### Aliases: tidy.epi.2by2 epiR_tidiers
>
> ### ** Examples
>
> ## Don't show:
> if (rlang::is_installed("epiR")) (if (getRversion() >= "3.4") withAutoprint else force)({ # examplesIf
+ ## End(Don't show)
+
+ # load libraries for models and data
+ library(epiR)
+
+ # generate data
+ dat <- matrix(c(13, 2163, 5, 3349), nrow = 2, byrow = TRUE)
+
+ rownames(dat) <- c("DF+", "DF-")
+ colnames(dat) <- c("FUS+", "FUS-")
+
+ # fit model
+ fit <- epi.2by2(
+ dat = as.table(dat), method = "cross.sectional",
+ conf.level = 0.95, units = 100, outcome = "as.columns"
+ )
+
+ # summarize model fit with tidiers
+ tidy(fit, parameters = "moa")
+ tidy(fit, parameters = "stat")
+ ## Don't show:
+ }) # examplesIf
> library(epiR)
Loading required package: survival
Package epiR 2.0.85 is loaded
Type help(epi.about) for summary information
Type browseVignettes(package = 'epiR') to learn how to use epiR for applied epidemiological analyses
> dat <- matrix(c(13, 2163, 5, 3349), nrow = 2, byrow = TRUE)
> rownames(dat) <- c("DF+", "DF-")
> colnames(dat) <- c("FUS+", "FUS-")
> fit <- epi.2by2(dat = as.table(dat), method = "cross.sectional", conf.level = 0.95,
+ units = 100, outcome = "as.columns")
> tidy(fit, parameters = "moa")
Error in `dplyr::bind_rows()`:
! Can't combine `PR.strata.wald$test.statistic` <double> and `chi2.strata.fisher$test.statistic` <character>.
Backtrace:
▆
1. ├─(if (getRversion() >= "3.4") withAutoprint else force)(...)
2. │ └─base::source(...)
3. │ ├─base::withVisible(eval(ei, envir))
4. │ └─base::eval(ei, envir)
5. │ └─base::eval(ei, envir)
6. ├─generics::tidy(fit, parameters = "moa")
7. ├─broom:::tidy.epi.2by2(fit, parameters = "moa")
8. │ └─dplyr::bind_rows(massoc[names(massoc) != "chi2.correction"], .id = "term")
9. │ └─vctrs::vec_rbind(!!!dots, .names_to = .id, .error_call = current_env())
10. └─vctrs (local) `<fn>`()
11. └─vctrs::vec_default_ptype2(...)
12. ├─base::withRestarts(...)
13. │ └─base (local) withOneRestart(expr, restarts[[1L]])
14. │ └─base (local) doWithOneRestart(return(expr), restart)
15. └─vctrs::stop_incompatible_type(...)
16. └─vctrs:::stop_incompatible(...)
17. └─vctrs:::stop_vctrs(...)
18. └─rlang::abort(message, class = c(class, "vctrs_error"), ..., call = call)
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.0.8
Check: examples
Result: ERROR
Running examples in ‘broom-Ex.R’ failed
The error most likely occurred in:
> ### Name: tidy.epi.2by2
> ### Title: Tidy a(n) epi.2by2 object
> ### Aliases: tidy.epi.2by2 epiR_tidiers
>
> ### ** Examples
>
> ## Don't show:
> if (rlang::is_installed("epiR")) (if (getRversion() >= "3.4") withAutoprint else force)({ # examplesIf
+ ## End(Don't show)
+
+ # load libraries for models and data
+ library(epiR)
+
+ # generate data
+ dat <- matrix(c(13, 2163, 5, 3349), nrow = 2, byrow = TRUE)
+
+ rownames(dat) <- c("DF+", "DF-")
+ colnames(dat) <- c("FUS+", "FUS-")
+
+ # fit model
+ fit <- epi.2by2(
+ dat = as.table(dat), method = "cross.sectional",
+ conf.level = 0.95, units = 100, outcome = "as.columns"
+ )
+
+ # summarize model fit with tidiers
+ tidy(fit, parameters = "moa")
+ tidy(fit, parameters = "stat")
+ ## Don't show:
+ }) # examplesIf
> library(epiR)
Loading required package: survival
Package epiR 2.0.85 is loaded
Type help(epi.about) for summary information
Type browseVignettes(package = 'epiR') to learn how to use epiR for applied epidemiological analyses
> dat <- matrix(c(13, 2163, 5, 3349), nrow = 2, byrow = TRUE)
> rownames(dat) <- c("DF+", "DF-")
> colnames(dat) <- c("FUS+", "FUS-")
> fit <- epi.2by2(dat = as.table(dat), method = "cross.sectional", conf.level = 0.95,
+ units = 100, outcome = "as.columns")
> tidy(fit, parameters = "moa")
Error in `dplyr::bind_rows()`:
! Can't combine `PR.strata.wald$test.statistic` <double> and `chi2.strata.fisher$test.statistic` <character>.
Backtrace:
▆
1. ├─(if (getRversion() >= "3.4") withAutoprint else force)(...)
2. │ └─base::source(...)
3. │ ├─base::withVisible(eval(ei, envir))
4. │ └─base::eval(ei, envir)
5. │ └─base::eval(ei, envir)
6. ├─generics::tidy(fit, parameters = "moa")
7. ├─broom:::tidy.epi.2by2(fit, parameters = "moa")
8. │ └─dplyr::bind_rows(massoc[names(massoc) != "chi2.correction"], .id = "term")
9. │ └─vctrs::vec_rbind(!!!dots, .names_to = .id, .error_call = current_env())
10. └─vctrs (local) `<fn>`()
11. └─vctrs::vec_default_ptype2(...)
12. ├─base::withRestarts(...)
13. │ └─base (local) withOneRestart(expr, restarts[[1L]])
14. │ └─base (local) doWithOneRestart(return(expr), restart)
15. └─vctrs::stop_incompatible_type(...)
16. └─vctrs:::stop_incompatible(...)
17. └─vctrs:::stop_vctrs(...)
18. └─rlang::abort(message, class = c(class, "vctrs_error"), ..., call = call)
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-release-windows-x86_64, r-oldrel-windows-x86_64
Current CRAN status: OK: 13
Current CRAN status: OK: 13
Current CRAN status: OK: 13
Current CRAN status: OK: 13
Current CRAN status: OK: 11
Current CRAN status: OK: 13
Current CRAN status: OK: 13
Current CRAN status: OK: 13
Current CRAN status: OK: 13
Current CRAN status: NOTE: 3, OK: 10
Version: 0.1.0
Check: installed package size
Result: NOTE
installed size is 6.4Mb
sub-directories of 1Mb or more:
dist 3.5Mb
doc 2.1Mb
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Current CRAN status: OK: 13