CRAN Package Check Results for Maintainer ‘Simon Couch <simon.couch at posit.co>’

Last updated on 2025-07-26 09:51:00 CEST.

Package ERROR NOTE OK
broom 6 7
chores 13
forested 13
gander 13
infer 13
mcptools 11
shinymodels 13
stacks 13
streamy 13
syrup 13
vitals 3 10
workflows 13

Package broom

Current CRAN status: ERROR: 6, OK: 7

Version: 1.0.8
Check: examples
Result: ERROR Running examples in ‘broom-Ex.R’ failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: tidy.epi.2by2 > ### Title: Tidy a(n) epi.2by2 object > ### Aliases: tidy.epi.2by2 epiR_tidiers > > ### ** Examples > > ## Don't show: > if (rlang::is_installed("epiR")) (if (getRversion() >= "3.4") withAutoprint else force)({ # examplesIf + ## End(Don't show) + + # load libraries for models and data + library(epiR) + + # generate data + dat <- matrix(c(13, 2163, 5, 3349), nrow = 2, byrow = TRUE) + + rownames(dat) <- c("DF+", "DF-") + colnames(dat) <- c("FUS+", "FUS-") + + # fit model + fit <- epi.2by2( + dat = as.table(dat), method = "cross.sectional", + conf.level = 0.95, units = 100, outcome = "as.columns" + ) + + # summarize model fit with tidiers + tidy(fit, parameters = "moa") + tidy(fit, parameters = "stat") + ## Don't show: + }) # examplesIf > library(epiR) Loading required package: survival Package epiR 2.0.85 is loaded Type help(epi.about) for summary information Type browseVignettes(package = 'epiR') to learn how to use epiR for applied epidemiological analyses > dat <- matrix(c(13, 2163, 5, 3349), nrow = 2, byrow = TRUE) > rownames(dat) <- c("DF+", "DF-") > colnames(dat) <- c("FUS+", "FUS-") > fit <- epi.2by2(dat = as.table(dat), method = "cross.sectional", conf.level = 0.95, + units = 100, outcome = "as.columns") > tidy(fit, parameters = "moa") Error in `dplyr::bind_rows()`: ! Can't combine `PR.strata.wald$test.statistic` <double> and `chi2.strata.fisher$test.statistic` <character>. Backtrace: ▆ 1. ├─(if (getRversion() >= "3.4") withAutoprint else force)(...) 2. │ └─base::source(...) 3. │ ├─base::withVisible(eval(ei, envir)) 4. │ └─base::eval(ei, envir) 5. │ └─base::eval(ei, envir) 6. ├─generics::tidy(fit, parameters = "moa") 7. ├─broom:::tidy.epi.2by2(fit, parameters = "moa") 8. │ └─dplyr::bind_rows(massoc[names(massoc) != "chi2.correction"], .id = "term") 9. │ └─vctrs::vec_rbind(!!!dots, .names_to = .id, .error_call = current_env()) 10. └─vctrs (local) `<fn>`() 11. └─vctrs::vec_default_ptype2(...) 12. ├─base::withRestarts(...) 13. │ └─base (local) withOneRestart(expr, restarts[[1L]]) 14. │ └─base (local) doWithOneRestart(return(expr), restart) 15. └─vctrs::stop_incompatible_type(...) 16. └─vctrs:::stop_incompatible(...) 17. └─vctrs:::stop_vctrs(...) 18. └─rlang::abort(message, class = c(class, "vctrs_error"), ..., call = call) Execution halted Examples with CPU (user + system) or elapsed time > 5s user system elapsed augment.poLCA 4.161 0.086 5.006 Flavor: r-devel-linux-x86_64-debian-clang

Version: 1.0.8
Check: examples
Result: ERROR Running examples in ‘broom-Ex.R’ failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: tidy.epi.2by2 > ### Title: Tidy a(n) epi.2by2 object > ### Aliases: tidy.epi.2by2 epiR_tidiers > > ### ** Examples > > ## Don't show: > if (rlang::is_installed("epiR")) (if (getRversion() >= "3.4") withAutoprint else force)({ # examplesIf + ## End(Don't show) + + # load libraries for models and data + library(epiR) + + # generate data + dat <- matrix(c(13, 2163, 5, 3349), nrow = 2, byrow = TRUE) + + rownames(dat) <- c("DF+", "DF-") + colnames(dat) <- c("FUS+", "FUS-") + + # fit model + fit <- epi.2by2( + dat = as.table(dat), method = "cross.sectional", + conf.level = 0.95, units = 100, outcome = "as.columns" + ) + + # summarize model fit with tidiers + tidy(fit, parameters = "moa") + tidy(fit, parameters = "stat") + ## Don't show: + }) # examplesIf > library(epiR) Loading required package: survival Package epiR 2.0.85 is loaded Type help(epi.about) for summary information Type browseVignettes(package = 'epiR') to learn how to use epiR for applied epidemiological analyses > dat <- matrix(c(13, 2163, 5, 3349), nrow = 2, byrow = TRUE) > rownames(dat) <- c("DF+", "DF-") > colnames(dat) <- c("FUS+", "FUS-") > fit <- epi.2by2(dat = as.table(dat), method = "cross.sectional", conf.level = 0.95, + units = 100, outcome = "as.columns") > tidy(fit, parameters = "moa") Error in `dplyr::bind_rows()`: ! Can't combine `PR.strata.wald$test.statistic` <double> and `chi2.strata.fisher$test.statistic` <character>. Backtrace: ▆ 1. ├─(if (getRversion() >= "3.4") withAutoprint else force)(...) 2. │ └─base::source(...) 3. │ ├─base::withVisible(eval(ei, envir)) 4. │ └─base::eval(ei, envir) 5. │ └─base::eval(ei, envir) 6. ├─generics::tidy(fit, parameters = "moa") 7. ├─broom:::tidy.epi.2by2(fit, parameters = "moa") 8. │ └─dplyr::bind_rows(massoc[names(massoc) != "chi2.correction"], .id = "term") 9. │ └─vctrs::vec_rbind(!!!dots, .names_to = .id, .error_call = current_env()) 10. └─vctrs (local) `<fn>`() 11. └─vctrs::vec_default_ptype2(...) 12. ├─base::withRestarts(...) 13. │ └─base (local) withOneRestart(expr, restarts[[1L]]) 14. │ └─base (local) doWithOneRestart(return(expr), restart) 15. └─vctrs::stop_incompatible_type(...) 16. └─vctrs:::stop_incompatible(...) 17. └─vctrs:::stop_vctrs(...) 18. └─rlang::abort(message, class = c(class, "vctrs_error"), ..., call = call) Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Version: 1.0.8
Check: examples
Result: ERROR Running examples in ‘broom-Ex.R’ failed The error most likely occurred in: > ### Name: tidy.epi.2by2 > ### Title: Tidy a(n) epi.2by2 object > ### Aliases: tidy.epi.2by2 epiR_tidiers > > ### ** Examples > > ## Don't show: > if (rlang::is_installed("epiR")) (if (getRversion() >= "3.4") withAutoprint else force)({ # examplesIf + ## End(Don't show) + + # load libraries for models and data + library(epiR) + + # generate data + dat <- matrix(c(13, 2163, 5, 3349), nrow = 2, byrow = TRUE) + + rownames(dat) <- c("DF+", "DF-") + colnames(dat) <- c("FUS+", "FUS-") + + # fit model + fit <- epi.2by2( + dat = as.table(dat), method = "cross.sectional", + conf.level = 0.95, units = 100, outcome = "as.columns" + ) + + # summarize model fit with tidiers + tidy(fit, parameters = "moa") + tidy(fit, parameters = "stat") + ## Don't show: + }) # examplesIf > library(epiR) Loading required package: survival Package epiR 2.0.85 is loaded Type help(epi.about) for summary information Type browseVignettes(package = 'epiR') to learn how to use epiR for applied epidemiological analyses > dat <- matrix(c(13, 2163, 5, 3349), nrow = 2, byrow = TRUE) > rownames(dat) <- c("DF+", "DF-") > colnames(dat) <- c("FUS+", "FUS-") > fit <- epi.2by2(dat = as.table(dat), method = "cross.sectional", conf.level = 0.95, + units = 100, outcome = "as.columns") > tidy(fit, parameters = "moa") Error in `dplyr::bind_rows()`: ! Can't combine `PR.strata.wald$test.statistic` <double> and `chi2.strata.fisher$test.statistic` <character>. Backtrace: ▆ 1. ├─(if (getRversion() >= "3.4") withAutoprint else force)(...) 2. │ └─base::source(...) 3. │ ├─base::withVisible(eval(ei, envir)) 4. │ └─base::eval(ei, envir) 5. │ └─base::eval(ei, envir) 6. ├─generics::tidy(fit, parameters = "moa") 7. ├─broom:::tidy.epi.2by2(fit, parameters = "moa") 8. │ └─dplyr::bind_rows(massoc[names(massoc) != "chi2.correction"], .id = "term") 9. │ └─vctrs::vec_rbind(!!!dots, .names_to = .id, .error_call = current_env()) 10. └─vctrs (local) `<fn>`() 11. └─vctrs::vec_default_ptype2(...) 12. ├─base::withRestarts(...) 13. │ └─base (local) withOneRestart(expr, restarts[[1L]]) 14. │ └─base (local) doWithOneRestart(return(expr), restart) 15. └─vctrs::stop_incompatible_type(...) 16. └─vctrs:::stop_incompatible(...) 17. └─vctrs:::stop_vctrs(...) 18. └─rlang::abort(message, class = c(class, "vctrs_error"), ..., call = call) Execution halted Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-release-windows-x86_64, r-oldrel-windows-x86_64

Package chores

Current CRAN status: OK: 13

Package forested

Current CRAN status: OK: 13

Package gander

Current CRAN status: OK: 13

Package infer

Current CRAN status: OK: 13

Package mcptools

Current CRAN status: OK: 11

Package shinymodels

Current CRAN status: OK: 13

Package stacks

Current CRAN status: OK: 13

Package streamy

Current CRAN status: OK: 13

Package syrup

Current CRAN status: OK: 13

Package vitals

Current CRAN status: NOTE: 3, OK: 10

Version: 0.1.0
Check: installed package size
Result: NOTE installed size is 6.4Mb sub-directories of 1Mb or more: dist 3.5Mb doc 2.1Mb Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Package workflows

Current CRAN status: OK: 13