Last updated on 2026-03-22 08:50:50 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 15.09 | 336.78 | 351.87 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 11.24 | 197.60 | 208.84 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 24.00 | 293.39 | 317.39 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 31.00 | 332.12 | 363.12 | OK | |
| r-devel-macos-arm64 | 1.1.4 | 3.00 | 44.00 | 47.00 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 24.00 | 192.00 | 216.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 14.04 | 333.31 | 347.35 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 13.91 | 345.24 | 359.15 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 12.00 | 396.00 | 408.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 22.00 | 194.00 | 216.00 | ERROR | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 10.00 | 378.00 | 388.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 26.00 | 247.00 | 273.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [103s/357s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.557, system: 0.045, elapsed: 2.177 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.615, system: 0.070, elapsed: 13.530 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.221, system: 0.019, elapsed: 0.958 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.801, system: 0.763, elapsed: 60.969 seconds]
Computing values for grid cells...
... done. [user: 0.177, system: 0.004, elapsed: 0.191 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.960, system: 0.925, elapsed: 78.593 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.623, system: 0.050, elapsed: 2.184 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.675, system: 0.113, elapsed: 13.965 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.224, system: 0.017, elapsed: 0.420 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.770, system: 0.710, elapsed: 52.931 seconds]
Computing values for grid cells...
... done. [user: 0.183, system: 0.003, elapsed: 0.342 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.069, system: 0.926, elapsed: 70.643 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.541, system: 0.031, elapsed: 2.963 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.589, system: 0.051, elapsed: 15.658 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.223, system: 0.015, elapsed: 0.935 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.994, system: 0.845, elapsed: 127.864 seconds]
Computing values for grid cells...
... done. [user: 0.170, system: 0.002, elapsed: 0.202 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.266, system: 0.239, elapsed: 1.251 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.463, system: 1.226, elapsed: 149.999 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.591, system: 0.036, elapsed: 2.617 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.619, system: 0.088, elapsed: 13.116 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.218, system: 0.016, elapsed: 0.369 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.080, system: 0.730, elapsed: 18.263 seconds]
Computing values for grid cells...
... done. [user: 0.182, system: 0.005, elapsed: 0.197 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 15.178, system: 1.045, elapsed: 16.160 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 34.570, system: 1.944, elapsed: 51.614 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: examples
Result: ERROR
Running examples in 'mapi-Ex.R' failed
The error most likely occurred in:
> ### Name: MAPI_GridHexagonal
> ### Title: Function MAPI_GridHexagonal
> ### Aliases: MAPI_GridHexagonal
>
> ### ** Examples
>
> data("samples")
> # Builds a grid of hexagonal cells according to samples coordinates (columns x and y)
> # using the EPSG:3857 projection and an halfwidth cell value of hw=250m.
> grid <- MAPI_GridHexagonal(samples, crs=3857, hw=250)
Building local cartesian grid...
Flavor: r-release-windows-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [102s/332s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.663, system: 0.051, elapsed: 2.043 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.704, system: 0.119, elapsed: 13.967 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.219, system: 0.019, elapsed: 0.392 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.384, system: 0.776, elapsed: 11.689 seconds]
Computing values for grid cells...
... done. [user: 0.178, system: 0.004, elapsed: 0.168 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.807, system: 1.000, elapsed: 28.996 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.600, system: 0.036, elapsed: 2.005 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.542, system: 0.063, elapsed: 12.340 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.214, system: 0.016, elapsed: 1.114 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.558, system: 0.745, elapsed: 82.953 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.003, elapsed: 0.411 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.680, system: 0.883, elapsed: 99.526 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.552, system: 0.033, elapsed: 4.071 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.469, system: 0.059, elapsed: 20.595 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.215, system: 0.016, elapsed: 1.133 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.690, system: 0.817, elapsed: 117.781 seconds]
Computing values for grid cells...
... done. [user: 0.172, system: 0.005, elapsed: 0.180 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.258, system: 0.312, elapsed: 1.104 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.014, system: 1.268, elapsed: 146.056 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.524, system: 0.027, elapsed: 2.131 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.655, system: 0.068, elapsed: 14.069 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.214, system: 0.016, elapsed: 0.686 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.604, system: 0.826, elapsed: 17.203 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.003, elapsed: 0.163 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 12.807, system: 0.754, elapsed: 16.623 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 32.821, system: 1.734, elapsed: 51.807 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64