Last updated on 2026-04-13 08:53:15 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 14.70 | 272.80 | 287.50 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 11.41 | 231.23 | 242.64 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 22.00 | 303.98 | 325.98 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 31.00 | 345.52 | 376.52 | OK | |
| r-devel-macos-arm64 | 1.1.4 | 4.00 | 46.00 | 50.00 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 22.00 | 198.00 | 220.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 17.39 | 342.95 | 360.34 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 12.92 | 348.12 | 361.04 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 12.00 | 448.00 | 460.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 18.00 | 0.00 | 18.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 11.00 | 622.00 | 633.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 23.00 | 243.00 | 266.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [110s/402s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.723, system: 0.078, elapsed: 3.471 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.511, system: 0.089, elapsed: 17.075 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.235, system: 0.023, elapsed: 0.846 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.928, system: 0.853, elapsed: 60.179 seconds]
Computing values for grid cells...
... done. [user: 0.178, system: 0.008, elapsed: 0.322 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.175, system: 1.083, elapsed: 82.930 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.710, system: 0.071, elapsed: 3.705 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.747, system: 0.178, elapsed: 19.298 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.218, system: 0.021, elapsed: 1.066 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.328, system: 0.927, elapsed: 102.803 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.005, elapsed: 0.178 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.827, system: 1.247, elapsed: 128.157 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.896, system: 0.079, elapsed: 2.433 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.758, system: 0.152, elapsed: 16.210 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.316, system: 0.018, elapsed: 1.218 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.229, system: 0.986, elapsed: 127.238 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.007, elapsed: 0.277 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.345, system: 0.371, elapsed: 1.840 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 21.565, system: 1.677, elapsed: 150.096 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.655, system: 0.066, elapsed: 2.481 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.421, system: 0.129, elapsed: 9.783 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.288, system: 0.030, elapsed: 0.240 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 10.460, system: 1.014, elapsed: 5.318 seconds]
Computing values for grid cells...
... done. [user: 0.162, system: 0.006, elapsed: 0.166 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 14.329, system: 1.002, elapsed: 12.241 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 37.169, system: 2.319, elapsed: 31.286 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [101s/568s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.619, system: 0.054, elapsed: 2.933 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.629, system: 0.082, elapsed: 15.795 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.220, system: 0.022, elapsed: 1.143 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.443, system: 0.760, elapsed: 77.213 seconds]
Computing values for grid cells...
... done. [user: 0.181, system: 0.008, elapsed: 0.446 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.667, system: 0.953, elapsed: 98.514 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.768, system: 0.079, elapsed: 4.532 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.827, system: 0.233, elapsed: 21.749 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.219, system: 0.022, elapsed: 1.158 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.039, system: 1.100, elapsed: 149.222 seconds]
Computing values for grid cells...
... done. [user: 0.184, system: 0.010, elapsed: 0.361 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.616, system: 1.476, elapsed: 178.179 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.569, system: 0.039, elapsed: 3.278 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.580, system: 0.078, elapsed: 17.735 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.218, system: 0.017, elapsed: 1.144 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.935, system: 0.919, elapsed: 111.788 seconds]
Computing values for grid cells...
... done. [user: 0.172, system: 0.007, elapsed: 0.225 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.287, system: 0.292, elapsed: 1.393 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.458, system: 1.402, elapsed: 136.754 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.593, system: 0.048, elapsed: 2.742 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.818, system: 0.086, elapsed: 15.486 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.220, system: 0.023, elapsed: 1.129 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.112, system: 0.863, elapsed: 82.398 seconds]
Computing values for grid cells...
... done. [user: 0.161, system: 0.003, elapsed: 0.432 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.621, system: 0.717, elapsed: 41.804 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 31.215, system: 1.778, elapsed: 145.176 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64