Last updated on 2025-09-19 12:50:37 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.52 | 248.19 | 261.71 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 9.75 | 221.96 | 231.71 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 309.63 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 408.21 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 184.00 | 204.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 14.58 | 299.55 | 314.13 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.39 | 239.08 | 253.47 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 203.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 19.00 | 181.00 | 200.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 188.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 23.00 | 242.00 | 265.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [79s/135s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.507, system: 0.046, elapsed: 2.554 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.022, system: 0.104, elapsed: 14.831 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.013, elapsed: 0.324 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.760, system: 0.191, elapsed: 5.858 seconds]
Computing values for grid cells...
... done. [user: 0.159, system: 0.004, elapsed: 0.166 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.158, system: 0.379, elapsed: 24.557 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.451, system: 0.039, elapsed: 1.782 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.029, system: 0.110, elapsed: 20.215 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.010, elapsed: 0.304 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.692, system: 0.166, elapsed: 5.237 seconds]
Computing values for grid cells...
... done. [user: 0.161, system: 0.003, elapsed: 0.271 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.063, system: 0.352, elapsed: 28.702 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.503, system: 0.031, elapsed: 2.605 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.981, system: 0.060, elapsed: 15.163 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.191, system: 0.013, elapsed: 0.399 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.782, system: 0.186, elapsed: 7.041 seconds]
Computing values for grid cells...
... done. [user: 0.161, system: 0.004, elapsed: 0.329 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.157, system: 0.215, elapsed: 1.194 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.423, system: 0.530, elapsed: 27.898 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.510, system: 0.043, elapsed: 2.302 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.110, system: 0.097, elapsed: 15.025 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.188, system: 0.012, elapsed: 0.558 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.781, system: 0.187, elapsed: 8.603 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.003, elapsed: 0.238 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.328, system: 0.489, elapsed: 17.906 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.744, system: 0.864, elapsed: 45.925 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [79s/123s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.560, system: 0.045, elapsed: 2.501 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.072, system: 0.129, elapsed: 14.971 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.015, elapsed: 0.273 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.648, system: 0.202, elapsed: 5.563 seconds]
Computing values for grid cells...
... done. [user: 0.159, system: 0.004, elapsed: 0.244 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.165, system: 0.417, elapsed: 24.517 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.523, system: 0.034, elapsed: 2.214 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.996, system: 0.074, elapsed: 13.792 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.189, system: 0.013, elapsed: 0.309 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.726, system: 0.174, elapsed: 6.286 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.005, elapsed: 0.255 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.138, system: 0.325, elapsed: 23.722 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.526, system: 0.034, elapsed: 2.376 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.986, system: 0.082, elapsed: 13.352 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.181, system: 0.010, elapsed: 0.253 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.514, system: 0.162, elapsed: 5.968 seconds]
Computing values for grid cells...
... done. [user: 0.177, system: 0.014, elapsed: 0.345 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.076, system: 0.234, elapsed: 1.189 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.091, system: 0.569, elapsed: 24.504 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.493, system: 0.029, elapsed: 2.625 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.870, system: 0.065, elapsed: 15.130 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.179, system: 0.011, elapsed: 0.498 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.574, system: 0.169, elapsed: 6.554 seconds]
Computing values for grid cells...
... done. [user: 0.175, system: 0.006, elapsed: 0.343 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.193, system: 0.467, elapsed: 16.799 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.125, system: 0.775, elapsed: 43.259 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64