Last updated on 2025-11-06 15:50:12 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.73 | 259.99 | 272.72 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.01 | 218.21 | 228.22 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 33.00 | 275.91 | 308.91 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 32.00 | 335.72 | 367.72 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 22.00 | 187.00 | 209.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.18 | 260.60 | 275.78 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 15.44 | 269.38 | 284.82 | OK | |
| r-release-macos-arm64 | 1.1.4 | 6.00 | 96.00 | 102.00 | OK | |
| r-release-macos-x86_64 | 1.1.4 | 14.00 | 187.00 | 201.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 187.00 | 207.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 6.00 | 92.00 | 98.00 | OK | |
| r-oldrel-macos-x86_64 | 1.1.4 | 14.00 | 188.00 | 202.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 25.00 | 239.00 | 264.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [85s/140s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.858, system: 0.113, elapsed: 3.437 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.001, system: 0.457, elapsed: 16.848 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.208, system: 0.020, elapsed: 0.344 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.074, system: 0.211, elapsed: 6.690 seconds]
Computing values for grid cells...
... done. [user: 0.176, system: 0.004, elapsed: 0.276 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.880, system: 0.843, elapsed: 28.630 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.551, system: 0.042, elapsed: 2.450 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.529, system: 0.100, elapsed: 14.977 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.194, system: 0.010, elapsed: 0.237 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.871, system: 0.163, elapsed: 6.470 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.004, elapsed: 0.344 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.872, system: 0.342, elapsed: 25.329 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.654, system: 0.036, elapsed: 3.176 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.603, system: 0.094, elapsed: 15.284 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.197, system: 0.012, elapsed: 0.324 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.928, system: 0.195, elapsed: 6.492 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.003, elapsed: 0.242 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.203, system: 0.211, elapsed: 1.108 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.400, system: 0.578, elapsed: 27.747 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.523, system: 0.034, elapsed: 2.453 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.621, system: 0.080, elapsed: 16.288 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.202, system: 0.012, elapsed: 0.305 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.919, system: 0.179, elapsed: 7.829 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.004, elapsed: 0.443 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.839, system: 0.486, elapsed: 20.583 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.932, system: 0.831, elapsed: 49.164 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [84s/134s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.600, system: 0.040, elapsed: 2.711 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.472, system: 0.051, elapsed: 15.360 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.203, system: 0.016, elapsed: 0.389 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.762, system: 0.184, elapsed: 6.374 seconds]
Computing values for grid cells...
... done. [user: 0.179, system: 0.007, elapsed: 0.311 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.772, system: 0.323, elapsed: 26.131 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.603, system: 0.033, elapsed: 2.350 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.614, system: 0.067, elapsed: 15.289 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.196, system: 0.013, elapsed: 0.303 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.763, system: 0.166, elapsed: 5.720 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.006, elapsed: 0.266 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.901, system: 0.320, elapsed: 24.804 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.783, system: 0.039, elapsed: 3.364 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.799, system: 0.122, elapsed: 16.659 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.197, system: 0.011, elapsed: 0.392 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.828, system: 0.195, elapsed: 5.766 seconds]
Computing values for grid cells...
... done. [user: 0.184, system: 0.016, elapsed: 0.263 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.151, system: 0.269, elapsed: 1.117 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.582, system: 0.690, elapsed: 28.649 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.634, system: 0.038, elapsed: 2.554 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.624, system: 0.135, elapsed: 15.668 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.197, system: 0.013, elapsed: 0.304 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.853, system: 0.193, elapsed: 5.891 seconds]
Computing values for grid cells...
... done. [user: 0.184, system: 0.005, elapsed: 0.258 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.827, system: 0.603, elapsed: 20.131 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.988, system: 1.022, elapsed: 45.773 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64