Last updated on 2025-07-08 09:50:03 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.3 | 13.96 | 194.30 | 208.26 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.75 | 263.18 | 273.93 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 335.99 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 383.96 | OK | |||
| r-devel-windows-x86_64 | 1.1.3 | 19.00 | 159.00 | 178.00 | OK | |
| r-patched-linux-x86_64 | 1.1.3 | 15.52 | 236.32 | 251.84 | OK | |
| r-release-linux-x86_64 | 1.1.3 | 14.35 | 218.61 | 232.96 | OK | |
| r-release-macos-arm64 | 1.0.5 | 41.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 178.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 184.00 | 205.00 | OK | |
| r-oldrel-macos-arm64 | 1.0.5 | 36.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 153.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 236.00 | 260.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [79s/126s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.483, system: 0.046, elapsed: 1.874 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.995, system: 0.129, elapsed: 11.870 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.015, elapsed: 0.324 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.610, system: 0.177, elapsed: 4.198 seconds]
Computing values for grid cells...
... done. [user: 0.162, system: 0.005, elapsed: 0.242 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.976, system: 0.395, elapsed: 19.237 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.478, system: 0.034, elapsed: 2.311 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.074, system: 0.088, elapsed: 12.870 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.011, elapsed: 0.274 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.763, system: 0.169, elapsed: 6.031 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.005, elapsed: 0.332 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.200, system: 0.332, elapsed: 22.729 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.526, system: 0.030, elapsed: 2.671 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.993, system: 0.081, elapsed: 15.751 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.188, system: 0.013, elapsed: 0.329 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.702, system: 0.180, elapsed: 5.773 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.005, elapsed: 0.279 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.190, system: 0.230, elapsed: 1.168 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.404, system: 0.560, elapsed: 27.033 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.494, system: 0.039, elapsed: 3.114 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.963, system: 0.072, elapsed: 24.235 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.013, elapsed: 0.400 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.825, system: 0.187, elapsed: 6.840 seconds]
Computing values for grid cells...
... done. [user: 0.162, system: 0.003, elapsed: 0.263 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.285, system: 0.462, elapsed: 15.187 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.562, system: 0.806, elapsed: 51.292 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [77s/100s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.491, system: 0.036, elapsed: 1.639 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.173, system: 0.047, elapsed: 8.327 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.180, system: 0.012, elapsed: 0.199 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.483, system: 0.177, elapsed: 4.097 seconds]
Computing values for grid cells...
... done. [user: 0.158, system: 0.003, elapsed: 0.164 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.002, system: 0.290, elapsed: 14.979 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.506, system: 0.030, elapsed: 1.605 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.902, system: 0.064, elapsed: 10.614 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.194, system: 0.011, elapsed: 0.333 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.595, system: 0.165, elapsed: 6.970 seconds]
Computing values for grid cells...
... done. [user: 0.159, system: 0.003, elapsed: 0.340 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.898, system: 0.292, elapsed: 20.694 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.598, system: 0.032, elapsed: 3.200 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.990, system: 0.063, elapsed: 14.873 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.183, system: 0.013, elapsed: 0.284 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.484, system: 0.159, elapsed: 5.096 seconds]
Computing values for grid cells...
... done. [user: 0.170, system: 0.004, elapsed: 0.239 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.070, system: 0.245, elapsed: 0.967 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.134, system: 0.536, elapsed: 25.781 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.441, system: 0.026, elapsed: 2.053 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.937, system: 0.051, elapsed: 11.652 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.181, system: 0.011, elapsed: 0.243 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.494, system: 0.166, elapsed: 4.493 seconds]
Computing values for grid cells...
... done. [user: 0.179, system: 0.009, elapsed: 0.273 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.020, system: 0.510, elapsed: 13.107 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 24.893, system: 0.807, elapsed: 32.678 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64