Last updated on 2026-02-03 03:50:05 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.94 | 253.68 | 267.62 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.17 | 207.98 | 218.15 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 26.00 | 298.75 | 324.75 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 28.00 | 350.39 | 378.39 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 21.00 | 198.00 | 219.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 14.55 | 283.39 | 297.94 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.60 | 288.17 | 302.77 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 11.00 | 617.00 | 628.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 22.00 | 189.00 | 211.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 11.00 | 695.00 | 706.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 25.00 | 252.00 | 277.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [110s/573s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.673, system: 0.060, elapsed: 2.006 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.644, system: 0.098, elapsed: 24.970 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.227, system: 0.019, elapsed: 1.220 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.118, system: 0.803, elapsed: 73.899 seconds]
Computing values for grid cells...
... done. [user: 0.183, system: 0.010, elapsed: 0.247 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.445, system: 1.020, elapsed: 103.278 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.798, system: 0.098, elapsed: 2.607 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.611, system: 0.350, elapsed: 11.467 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.306, system: 0.033, elapsed: 0.240 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 8.796, system: 1.155, elapsed: 84.370 seconds]
Computing values for grid cells...
... done. [user: 0.176, system: 0.003, elapsed: 0.511 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 21.308, system: 1.683, elapsed: 100.094 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.535, system: 0.030, elapsed: 4.992 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.609, system: 0.053, elapsed: 25.292 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.327, system: 0.016, elapsed: 1.464 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.140, system: 0.945, elapsed: 182.182 seconds]
Computing values for grid cells...
... done. [user: 0.185, system: 0.009, elapsed: 0.476 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.301, system: 0.375, elapsed: 2.347 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.804, system: 1.471, elapsed: 218.595 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.594, system: 0.061, elapsed: 4.225 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.567, system: 0.115, elapsed: 25.310 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.218, system: 0.016, elapsed: 1.147 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 8.132, system: 0.911, elapsed: 98.254 seconds]
Computing values for grid cells...
... done. [user: 0.173, system: 0.003, elapsed: 0.178 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 15.913, system: 1.179, elapsed: 13.323 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 36.390, system: 2.325, elapsed: 143.995 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [2m/11m]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.692, system: 0.054, elapsed: 5.244 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.512, system: 0.075, elapsed: 28.159 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.220, system: 0.020, elapsed: 1.200 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.923, system: 0.933, elapsed: 181.278 seconds]
Computing values for grid cells...
... done. [user: 0.170, system: 0.003, elapsed: 0.466 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.104, system: 1.110, elapsed: 218.396 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.543, system: 0.031, elapsed: 4.574 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.569, system: 0.051, elapsed: 27.041 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.217, system: 0.017, elapsed: 1.242 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.896, system: 0.942, elapsed: 181.397 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.004, elapsed: 0.461 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.946, system: 1.067, elapsed: 216.282 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.585, system: 0.035, elapsed: 4.944 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.542, system: 0.059, elapsed: 25.779 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.217, system: 0.017, elapsed: 1.267 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.220, system: 0.788, elapsed: 95.943 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.003, elapsed: 0.199 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.188, system: 0.308, elapsed: 1.191 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.586, system: 1.238, elapsed: 130.818 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.883, system: 0.050, elapsed: 3.457 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.531, system: 0.081, elapsed: 11.471 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.219, system: 0.015, elapsed: 0.278 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.828, system: 0.833, elapsed: 13.790 seconds]
Computing values for grid cells...
... done. [user: 0.184, system: 0.004, elapsed: 0.165 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.494, system: 0.624, elapsed: 42.351 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 31.925, system: 1.637, elapsed: 72.439 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64