CRAN Package Check Results for Maintainer ‘Azka Javaid <azka.javaid.gr at dartmouth.edu>’

Last updated on 2026-03-30 20:53:42 CEST.

Package	ERROR	NOTE	OK
scaper	1		13
SPECK	1	2	11
STREAK			14

Package scaper

Current CRAN status: ERROR: 1, OK: 13

Version: 0.2.0
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: --- re-building 'scaper-vignette-CytoSig.Rmd' using rmarkdown Performing log-normalization 0% 10 20 30 40 50 60 70 80 90 100% [----|----|----|----|----|----|----|----|----|----| **************************************************| Performing log-normalization 0% 10 20 30 40 50 60 70 80 90 100% [----|----|----|----|----|----|----|----|----|----| **************************************************| ! Package pdftex.def Error: File `ec02dfd7afbdbf34ecb6fab00197a77435fd302a.pdf' not found: using draft setting. Error: processing vignette 'scaper-vignette-CytoSig.Rmd' failed with diagnostics: LaTeX failed to compile D:/RCompile/CRANpkg/local/4.4/scaper.Rcheck/vign_test/scaper/vignettes/scaper-vignette-CytoSig.tex. See https://yihui.org/tinytex/r/#debugging for debugging tips. See scaper-vignette-CytoSig.log for more info. --- failed re-building 'scaper-vignette-CytoSig.Rmd' --- re-building 'scaper-vignette-Reactome.Rmd' using rmarkdown Performing log-normalization 0% 10 20 30 40 50 60 70 80 90 100% [----|----|----|----|----|----|----|----|----|----| **************************************************| ! Package pdftex.def Error: File `f12efb46c3c7a4b66080cfdde11b7d9ebad2fad9.pdf' not found: using draft setting. Error: processing vignette 'scaper-vignette-Reactome.Rmd' failed with diagnostics: LaTeX failed to compile D:/RCompile/CRANpkg/local/4.4/scaper.Rcheck/vign_test/scaper/vignettes/scaper-vignette-Reactome.tex. See https://yihui.org/tinytex/r/#debugging for debugging tips. See scaper-vignette-Reactome.log for more info. --- failed re-building 'scaper-vignette-Reactome.Rmd' SUMMARY: processing the following files failed: 'scaper-vignette-CytoSig.Rmd' 'scaper-vignette-Reactome.Rmd' Error: Vignette re-building failed. Execution halted Flavor: r-oldrel-windows-x86_64

Package SPECK

Current CRAN status: ERROR: 1, NOTE: 2, OK: 11

Version: 1.0.1
Check: installed package size
Result: NOTE installed size is 5.5Mb sub-directories of 1Mb or more: data 4.8Mb Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Version: 1.0.1
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: --- re-building 'SPECKVignette.Rmd' using rmarkdown Performing log-normalization 0% 10 20 30 40 50 60 70 80 90 100% [----|----|----|----|----|----|----|----|----|----| **************************************************| Calculating gene variances 0% 10 20 30 40 50 60 70 80 90 100% [----|----|----|----|----|----|----|----|----|----| **************************************************| Calculating feature variances of standardized and clipped values 0% 10 20 30 40 50 60 70 80 90 100% [----|----|----|----|----|----|----|----|----|----| **************************************************| | | | 0% | |== | 3% | |==== | 6% | |====== | 9% | |======== | 12% | |========== | 15% | |============ | 18% | |============== | 21% | |================ | 24% | |=================== | 26% | |===================== | 29% | |======================= | 32% | |========================= | 35% | |=========================== | 38% | |============================= | 41% | |=============================== | 44% | |================================= | 47% | |=================================== | 50% | |===================================== | 53% | |======================================= | 56% | |========================================= | 59% | |=========================================== | 62% | |============================================= | 65% | |=============================================== | 68% | |================================================= | 71% | |=================================================== | 74% | |====================================================== | 76% | |======================================================== | 79% | |========================================================== | 82% | |============================================================ | 85% | |============================================================== | 88% | |================================================================ | 91% | |================================================================== | 94% | |==================================================================== | 97% | |======================================================================| 100% 0% 10 20 30 40 50 60 70 80 90 100% [----|----|----|----|----|----|----|----|----|----| **************************************************| Using method 'umap' 0% 10 20 30 40 50 60 70 80 90 100% [----|----|----|----|----|----|----|----|----|----| **************************************************| ! Package pdftex.def Error: File `a4d45adad0adee0764e34b59728f1bab179f0fe3.pdf' not found: using draft setting. Error: processing vignette 'SPECKVignette.Rmd' failed with diagnostics: LaTeX failed to compile D:/RCompile/CRANpkg/local/4.4/SPECK.Rcheck/vign_test/SPECK/vignettes/SPECKVignette.tex. See https://yihui.org/tinytex/r/#debugging for debugging tips. See SPECKVignette.log for more info. --- failed re-building 'SPECKVignette.Rmd' SUMMARY: processing the following file failed: 'SPECKVignette.Rmd' Error: Vignette re-building failed. Execution halted Flavor: r-oldrel-windows-x86_64

Package STREAK

Current CRAN status: OK: 14