CRAN Package Check Results for Package RoBMA

Last updated on 2026-05-07 00:50:47 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 3.6.1 53.80 132.33 186.13 OK
r-devel-linux-x86_64-debian-gcc 3.6.1 32.21 91.20 123.41 ERROR
r-devel-linux-x86_64-fedora-clang 3.6.1 120.00 220.48 340.48 ERROR
r-devel-linux-x86_64-fedora-gcc 3.6.1 94.00 235.53 329.53 ERROR
r-devel-windows-x86_64 3.6.1 78.00 161.00 239.00 OK
r-patched-linux-x86_64 3.6.1 46.33 118.92 165.25 OK
r-release-linux-x86_64 3.6.1 44.19 120.15 164.34 OK
r-release-macos-arm64 3.6.1 17.00 29.00 46.00 OK
r-release-macos-x86_64 3.6.1 40.00 187.00 227.00 OK
r-release-windows-x86_64 3.6.1 78.00 156.00 234.00 OK
r-oldrel-macos-arm64 3.6.1 10.00 33.00 43.00 OK
r-oldrel-macos-x86_64 3.6.1 38.00 136.00 174.00 OK
r-oldrel-windows-x86_64 3.6.1 93.00 188.00 281.00 OK

Check Details

Version: 3.6.1
Check: whether package can be installed
Result: WARN Found the following significant warnings: Note: possible error in 'prior_weightfunction(distribution = "two.sided", ': unused arguments (distribution = "two.sided", parameters = list(alpha = c(1, 1), steps = c(0.05))) Note: possible error in 'prior_weightfunction(distribution = "two.sided", ': unused arguments (distribution = "two.sided", parameters = list(alpha = c(1, 1, 1), steps = c(0.05, 0.1))) Note: possible error in 'prior_weightfunction(distribution = "one.sided", ': unused arguments (distribution = "one.sided", parameters = list(alpha = c(1, 1), steps = c(0.05))) Note: possible error in 'prior_weightfunction(distribution = "one.sided", ': unused arguments (distribution = "one.sided", parameters = list(alpha = c(1, 1, 1), steps = c(0.025, 0.05))) Note: possible error in 'prior_weightfunction(distribution = "one.sided", ': unused arguments (distribution = "one.sided", parameters = list(alpha = c(1, 1, 1), steps = c(0.05, 0.5))) Note: possible error in 'prior_weightfunction(distribution = "one.sided", ': unused arguments (distribution = "one.sided", parameters = list(alpha = c(1, 1, 1, 1), steps = c(0.025, 0.05, 0.5))) See ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/RoBMA.Rcheck/00install.out’ for details. Information on the location(s) of code generating the ‘Note’s can be obtained by re-running with environment variable R_KEEP_PKG_SOURCE set to ‘yes’. * used C compiler: ‘gcc-15 (Debian 15.2.0-17) 15.2.0’ * used C++ compiler: ‘g++-15 (Debian 15.2.0-17) 15.2.0’ Flavor: r-devel-linux-x86_64-debian-gcc

Version: 3.6.1
Check: R code for possible problems
Result: NOTE .check_and_list_priors: possible error in prior_weightfunction(distribution = "two.sided", parameters = list(alpha = c(1, 1), steps = c(0.05)), prior_weights = 1/12): unused arguments (distribution = "two.sided", parameters = list(alpha = c(1, 1), steps = c(0.05))) .check_and_list_priors: possible error in prior_weightfunction(distribution = "two.sided", parameters = list(alpha = c(1, 1, 1), steps = c(0.05, 0.1)), prior_weights = 1/12): unused arguments (distribution = "two.sided", parameters = list(alpha = c(1, 1, 1), steps = c(0.05, 0.1))) .check_and_list_priors: possible error in prior_weightfunction(distribution = "one.sided", parameters = list(alpha = c(1, 1), steps = c(0.05)), prior_weights = 1/12): unused arguments (distribution = "one.sided", parameters = list(alpha = c(1, 1), steps = c(0.05))) .check_and_list_priors: possible error in prior_weightfunction(distribution = "one.sided", parameters = list(alpha = c(1, 1, 1), steps = c(0.025, 0.05)), prior_weights = 1/12): unused arguments (distribution = "one.sided", parameters = list(alpha = c(1, 1, 1), steps = c(0.025, 0.05))) .check_and_list_priors: possible error in prior_weightfunction(distribution = "one.sided", parameters = list(alpha = c(1, 1, 1), steps = c(0.05, 0.5)), prior_weights = 1/12): unused arguments (distribution = "one.sided", parameters = list(alpha = c(1, 1, 1), steps = c(0.05, 0.5))) .check_and_list_priors: possible error in prior_weightfunction(distribution = "one.sided", parameters = list(alpha = c(1, 1, 1, 1), steps = c(0.025, 0.05, 0.5)), prior_weights = 1/12): unused arguments (distribution = "one.sided", parameters = list(alpha = c(1, 1, 1, 1), steps = c(0.025, 0.05, 0.5))) .check_and_list_priors: possible error in prior_weightfunction(distribution = "two.sided", parameters = list(alpha = c(1, 1), steps = c(0.05)), prior_weights = 1/2): unused arguments (distribution = "two.sided", parameters = list(alpha = c(1, 1), steps = c(0.05))) .check_and_list_priors: possible error in prior_weightfunction(distribution = "two.sided", parameters = list(alpha = c(1, 1, 1), steps = c(0.05, 0.1)), prior_weights = 1/2): unused arguments (distribution = "two.sided", parameters = list(alpha = c(1, 1, 1), steps = c(0.05, 0.1))) check_setup: possible error in prior_weightfunction(distribution = "two.sided", parameters = list(alpha = c(1, 1), steps = c(0.05)), prior_weights = 1/12): unused arguments (distribution = "two.sided", parameters = list(alpha = c(1, 1), steps = c(0.05))) check_setup: possible error in prior_weightfunction(distribution = "two.sided", parameters = list(alpha = c(1, 1, 1), steps = c(0.05, 0.1)), prior_weights = 1/12): unused arguments (distribution = "two.sided", parameters = list(alpha = c(1, 1, 1), steps = c(0.05, 0.1))) check_setup: possible error in prior_weightfunction(distribution = "one.sided", parameters = list(alpha = c(1, 1), steps = c(0.05)), prior_weights = 1/12): unused arguments (distribution = "one.sided", parameters = list(alpha = c(1, 1), steps = c(0.05))) check_setup: possible error in prior_weightfunction(distribution = "one.sided", parameters = list(alpha = c(1, 1, 1), steps = c(0.025, 0.05)), prior_weights = 1/12): unused arguments (distribution = "one.sided", parameters = list(alpha = c(1, 1, 1), steps = c(0.025, 0.05))) check_setup: possible error in prior_weightfunction(distribution = "one.sided", parameters = list(alpha = c(1, 1, 1), steps = c(0.05, 0.5)), prior_weights = 1/12): unused arguments (distribution = "one.sided", parameters = list(alpha = c(1, 1, 1), steps = c(0.05, 0.5))) check_setup: possible error in prior_weightfunction(distribution = "one.sided", parameters = list(alpha = c(1, 1, 1, 1), steps = c(0.025, 0.05, 0.5)), prior_weights = 1/12): unused arguments (distribution = "one.sided", parameters = list(alpha = c(1, 1, 1, 1), steps = c(0.025, 0.05, 0.5))) check_setup.RoBMA: possible error in prior_weightfunction(distribution = "two.sided", parameters = list(alpha = c(1, 1), steps = c(0.05)), prior_weights = 1/12): unused arguments (distribution = "two.sided", parameters = list(alpha = c(1, 1), steps = c(0.05))) check_setup.RoBMA: possible error in prior_weightfunction(distribution = "two.sided", parameters = list(alpha = c(1, 1, 1), steps = c(0.05, 0.1)), prior_weights = 1/12): unused arguments (distribution = "two.sided", parameters = list(alpha = c(1, 1, 1), steps = c(0.05, 0.1))) check_setup.RoBMA: possible error in prior_weightfunction(distribution = "one.sided", parameters = list(alpha = c(1, 1), steps = c(0.05)), prior_weights = 1/12): unused arguments (distribution = "one.sided", parameters = list(alpha = c(1, 1), steps = c(0.05))) check_setup.RoBMA: possible error in prior_weightfunction(distribution = "one.sided", parameters = list(alpha = c(1, 1, 1), steps = c(0.025, 0.05)), prior_weights = 1/12): unused arguments (distribution = "one.sided", parameters = list(alpha = c(1, 1, 1), steps = c(0.025, 0.05))) check_setup.RoBMA: possible error in prior_weightfunction(distribution = "one.sided", parameters = list(alpha = c(1, 1, 1), steps = c(0.05, 0.5)), prior_weights = 1/12): unused arguments (distribution = "one.sided", parameters = list(alpha = c(1, 1, 1), steps = c(0.05, 0.5))) check_setup.RoBMA: possible error in prior_weightfunction(distribution = "one.sided", parameters = list(alpha = c(1, 1, 1, 1), steps = c(0.025, 0.05, 0.5)), prior_weights = 1/12): unused arguments (distribution = "one.sided", parameters = list(alpha = c(1, 1, 1, 1), steps = c(0.025, 0.05, 0.5))) check_setup.RoBMA.reg: possible error in prior_weightfunction(distribution = "two.sided", parameters = list(alpha = c(1, 1), steps = c(0.05)), prior_weights = 1/12): unused arguments (distribution = "two.sided", parameters = list(alpha = c(1, 1), steps = c(0.05))) check_setup.RoBMA.reg: possible error in prior_weightfunction(distribution = "two.sided", parameters = list(alpha = c(1, 1, 1), steps = c(0.05, 0.1)), prior_weights = 1/12): unused arguments (distribution = "two.sided", parameters = list(alpha = c(1, 1, 1), steps = c(0.05, 0.1))) check_setup.RoBMA.reg: possible error in prior_weightfunction(distribution = "one.sided", parameters = list(alpha = c(1, 1), steps = c(0.05)), prior_weights = 1/12): unused arguments (distribution = "one.sided", parameters = list(alpha = c(1, 1), steps = c(0.05))) check_setup.RoBMA.reg: possible error in prior_weightfunction(distribution = "one.sided", parameters = list(alpha = c(1, 1, 1), steps = c(0.025, 0.05)), prior_weights = 1/12): unused arguments (distribution = "one.sided", parameters = list(alpha = c(1, 1, 1), steps = c(0.025, 0.05))) check_setup.RoBMA.reg: possible error in prior_weightfunction(distribution = "one.sided", parameters = list(alpha = c(1, 1, 1), steps = c(0.05, 0.5)), prior_weights = 1/12): unused arguments (distribution = "one.sided", parameters = list(alpha = c(1, 1, 1), steps = c(0.05, 0.5))) check_setup.RoBMA.reg: possible error in prior_weightfunction(distribution = "one.sided", parameters = list(alpha = c(1, 1, 1, 1), steps = c(0.025, 0.05, 0.5)), prior_weights = 1/12): unused arguments (distribution = "one.sided", parameters = list(alpha = c(1, 1, 1, 1), steps = c(0.025, 0.05, 0.5))) check_setup.reg: possible error in prior_weightfunction(distribution = "two.sided", parameters = list(alpha = c(1, 1), steps = c(0.05)), prior_weights = 1/12): unused arguments (distribution = "two.sided", parameters = list(alpha = c(1, 1), steps = c(0.05))) check_setup.reg: possible error in prior_weightfunction(distribution = "two.sided", parameters = list(alpha = c(1, 1, 1), steps = c(0.05, 0.1)), prior_weights = 1/12): unused arguments (distribution = "two.sided", parameters = list(alpha = c(1, 1, 1), steps = c(0.05, 0.1))) check_setup.reg: possible error in prior_weightfunction(distribution = "one.sided", parameters = list(alpha = c(1, 1), steps = c(0.05)), prior_weights = 1/12): unused arguments (distribution = "one.sided", parameters = list(alpha = c(1, 1), steps = c(0.05))) check_setup.reg: possible error in prior_weightfunction(distribution = "one.sided", parameters = list(alpha = c(1, 1, 1), steps = c(0.025, 0.05)), prior_weights = 1/12): unused arguments (distribution = "one.sided", parameters = list(alpha = c(1, 1, 1), steps = c(0.025, 0.05))) check_setup.reg: possible error in prior_weightfunction(distribution = "one.sided", parameters = list(alpha = c(1, 1, 1), steps = c(0.05, 0.5)), prior_weights = 1/12): unused arguments (distribution = "one.sided", parameters = list(alpha = c(1, 1, 1), steps = c(0.05, 0.5))) check_setup.reg: possible error in prior_weightfunction(distribution = "one.sided", parameters = list(alpha = c(1, 1, 1, 1), steps = c(0.025, 0.05, 0.5)), prior_weights = 1/12): unused arguments (distribution = "one.sided", parameters = list(alpha = c(1, 1, 1, 1), steps = c(0.025, 0.05, 0.5))) set_default_priors: possible error in prior_weightfunction(distribution = "two.sided", parameters = list(alpha = c(1, 1), steps = c(0.05)), prior_weights = 1/12): unused arguments (distribution = "two.sided", parameters = list(alpha = c(1, 1), steps = c(0.05))) set_default_priors: possible error in prior_weightfunction(distribution = "two.sided", parameters = list(alpha = c(1, 1, 1), steps = c(0.05, 0.1)), prior_weights = 1/12): unused arguments (distribution = "two.sided", parameters = list(alpha = c(1, 1, 1), steps = c(0.05, 0.1))) set_default_priors: possible error in prior_weightfunction(distribution = "one.sided", parameters = list(alpha = c(1, 1), steps = c(0.05)), prior_weights = 1/12): unused arguments (distribution = "one.sided", parameters = list(alpha = c(1, 1), steps = c(0.05))) set_default_priors: possible error in prior_weightfunction(distribution = "one.sided", parameters = list(alpha = c(1, 1, 1), steps = c(0.025, 0.05)), prior_weights = 1/12): unused arguments (distribution = "one.sided", parameters = list(alpha = c(1, 1, 1), steps = c(0.025, 0.05))) set_default_priors: possible error in prior_weightfunction(distribution = "one.sided", parameters = list(alpha = c(1, 1, 1), steps = c(0.05, 0.5)), prior_weights = 1/12): unused arguments (distribution = "one.sided", parameters = list(alpha = c(1, 1, 1), steps = c(0.05, 0.5))) set_default_priors: possible error in prior_weightfunction(distribution = "one.sided", parameters = list(alpha = c(1, 1, 1, 1), steps = c(0.025, 0.05, 0.5)), prior_weights = 1/12): unused arguments (distribution = "one.sided", parameters = list(alpha = c(1, 1, 1, 1), steps = c(0.025, 0.05, 0.5))) Flavors: r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 3.6.1
Check: for code/documentation mismatches
Result: WARN Codoc mismatches from Rd file 'prior_weightfunction.Rd': prior_weightfunction Code: function(side = "one-sided", steps = c(0.025, 0.05), weights = wf_cumulative(), reference = "most_significant", prior_weights = 1) Docs: function(distribution, parameters, prior_weights = 1) Argument names in code not in docs: side steps weights reference Argument names in docs not in code: distribution parameters Mismatches in argument names: Position: 1 Code: side Docs: distribution Position: 2 Code: steps Docs: parameters Position: 3 Code: weights Docs: prior_weights Flavors: r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 3.6.1
Check: examples
Result: ERROR Running examples in ‘RoBMA-Ex.R’ failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: check_setup > ### Title: Prints summary of '"RoBMA"' ensemble implied by the specified > ### priors > ### Aliases: check_setup check_setup.RoBMA > > ### ** Examples > > # check default RoBMA setup > check_setup() Error in prior_weightfunction(distribution = "two.sided", parameters = list(alpha = c(1, : unused arguments (distribution = "two.sided", parameters = list(alpha = c(1, 1), steps = c(0.05))) Calls: check_setup ... .check_and_list_priors -> .check_and_list_component_priors Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Version: 3.6.1
Check: tests
Result: ERROR Running ‘testthat.R’ [1s/1s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(vdiffr) > library(RoBMA) Loading required namespace: runjags Loading required namespace: mvtnorm RoBMA version 3.3 now features spike-and-slab style model-averaging via the 'algorithm = "ss"' argument. See 'vignette("FastRoBMA", package = "RoBMA")' for more details ('algorithm = "ss"' argument will become the default setting in the future major release of the package). > > test_check("RoBMA") Saving _problems/test-00-CRAN-13.R [ FAIL 1 | WARN 0 | SKIP 0 | PASS 0 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-00-CRAN.R:13:3'): Basic functionality works ──────────────────── Error in `prior_weightfunction(distribution = "two.sided", parameters = list(alpha = c(1, 1), steps = c(0.05)), prior_weights = 1/12)`: unused arguments (distribution = "two.sided", parameters = list(alpha = c(1, 1), steps = c(0.05))) Backtrace: ▆ 1. ├─base::suppressWarnings(...) at test-00-CRAN.R:13:3 2. │ └─base::withCallingHandlers(...) 3. └─RoBMA::RoBMA(...) 4. ├─RoBMA:::.check_and_list_priors(...) 5. │ └─RoBMA:::.check_and_list_component_priors(...) 6. └─RoBMA::set_default_priors("bias", rescale = rescale_priors) [ FAIL 1 | WARN 0 | SKIP 0 | PASS 0 ] Error: ! Test failures. Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Version: 3.6.1
Check: whether package can be installed
Result: WARN Found the following significant warnings: Note: possible error in 'prior_weightfunction(distribution = "two.sided", ': unused arguments (distribution = "two.sided", parameters = list(alpha = c(1, 1), steps = c(0.05))) Note: possible error in 'prior_weightfunction(distribution = "two.sided", ': unused arguments (distribution = "two.sided", parameters = list(alpha = c(1, 1, 1), steps = c(0.05, 0.1))) Note: possible error in 'prior_weightfunction(distribution = "one.sided", ': unused arguments (distribution = "one.sided", parameters = list(alpha = c(1, 1), steps = c(0.05))) Note: possible error in 'prior_weightfunction(distribution = "one.sided", ': unused arguments (distribution = "one.sided", parameters = list(alpha = c(1, 1, 1), steps = c(0.025, 0.05))) Note: possible error in 'prior_weightfunction(distribution = "one.sided", ': unused arguments (distribution = "one.sided", parameters = list(alpha = c(1, 1, 1), steps = c(0.05, 0.5))) Note: possible error in 'prior_weightfunction(distribution = "one.sided", ': unused arguments (distribution = "one.sided", parameters = list(alpha = c(1, 1, 1, 1), steps = c(0.025, 0.05, 0.5))) See ‘/data/gannet/ripley/R/packages/tests-clang/RoBMA.Rcheck/00install.out’ for details. Information on the location(s) of code generating the ‘Note’s can be obtained by re-running with environment variable R_KEEP_PKG_SOURCE set to ‘yes’. * used C compiler: ‘clang version 22.1.4 (https://github.com/llvm/llvm-project 35990504507d79e0b9deb809c8ee5e1b34ceef20)’ * used C++ compiler: ‘clang version 22.1.4 (https://github.com/llvm/llvm-project 35990504507d79e0b9deb809c8ee5e1b34ceef20)’ Flavor: r-devel-linux-x86_64-fedora-clang

Version: 3.6.1
Check: examples
Result: ERROR Running examples in ‘RoBMA-Ex.R’ failed The error most likely occurred in: > ### Name: check_setup > ### Title: Prints summary of '"RoBMA"' ensemble implied by the specified > ### priors > ### Aliases: check_setup check_setup.RoBMA > > ### ** Examples > > # check default RoBMA setup > check_setup() Error in prior_weightfunction(distribution = "two.sided", parameters = list(alpha = c(1, : unused arguments (distribution = "two.sided", parameters = list(alpha = c(1, 1), steps = c(0.05))) Calls: check_setup ... .check_and_list_priors -> .check_and_list_component_priors Execution halted Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 3.6.1
Check: tests
Result: ERROR Running ‘testthat.R’ Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(vdiffr) > library(RoBMA) Loading required namespace: runjags Loading required namespace: mvtnorm RoBMA version 3.3 now features spike-and-slab style model-averaging via the 'algorithm = "ss"' argument. See 'vignette("FastRoBMA", package = "RoBMA")' for more details ('algorithm = "ss"' argument will become the default setting in the future major release of the package). > > test_check("RoBMA") Saving _problems/test-00-CRAN-13.R [ FAIL 1 | WARN 0 | SKIP 0 | PASS 0 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-00-CRAN.R:13:3'): Basic functionality works ──────────────────── Error in `prior_weightfunction(distribution = "two.sided", parameters = list(alpha = c(1, 1), steps = c(0.05)), prior_weights = 1/12)`: unused arguments (distribution = "two.sided", parameters = list(alpha = c(1, 1), steps = c(0.05))) Backtrace: ▆ 1. ├─base::suppressWarnings(...) at test-00-CRAN.R:13:3 2. │ └─base::withCallingHandlers(...) 3. └─RoBMA::RoBMA(...) 4. ├─RoBMA:::.check_and_list_priors(...) 5. │ └─RoBMA:::.check_and_list_component_priors(...) 6. └─RoBMA::set_default_priors("bias", rescale = rescale_priors) [ FAIL 1 | WARN 0 | SKIP 0 | PASS 0 ] Error: ! Test failures. Execution halted Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 3.6.1
Check: whether package can be installed
Result: WARN Found the following significant warnings: Note: possible error in 'prior_weightfunction(distribution = "two.sided", ': unused arguments (distribution = "two.sided", parameters = list(alpha = c(1, 1), steps = c(0.05))) Note: possible error in 'prior_weightfunction(distribution = "two.sided", ': unused arguments (distribution = "two.sided", parameters = list(alpha = c(1, 1, 1), steps = c(0.05, 0.1))) Note: possible error in 'prior_weightfunction(distribution = "one.sided", ': unused arguments (distribution = "one.sided", parameters = list(alpha = c(1, 1), steps = c(0.05))) Note: possible error in 'prior_weightfunction(distribution = "one.sided", ': unused arguments (distribution = "one.sided", parameters = list(alpha = c(1, 1, 1), steps = c(0.025, 0.05))) Note: possible error in 'prior_weightfunction(distribution = "one.sided", ': unused arguments (distribution = "one.sided", parameters = list(alpha = c(1, 1, 1), steps = c(0.05, 0.5))) Note: possible error in 'prior_weightfunction(distribution = "one.sided", ': unused arguments (distribution = "one.sided", parameters = list(alpha = c(1, 1, 1, 1), steps = c(0.025, 0.05, 0.5))) See ‘/data/gannet/ripley/R/packages/tests-devel/RoBMA.Rcheck/00install.out’ for details. Information on the location(s) of code generating the ‘Note’s can be obtained by re-running with environment variable R_KEEP_PKG_SOURCE set to ‘yes’. * used C compiler: ‘gcc (GCC) 15.2.1 20260123 (Red Hat 15.2.1-7)’ * used C++ compiler: ‘g++ (GCC) 15.2.1 20260123 (Red Hat 15.2.1-7)’ Flavor: r-devel-linux-x86_64-fedora-gcc