Last updated on 2025-11-06 15:50:04 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.3.1 | 8.51 | 73.53 | 82.04 | OK | |
| r-devel-linux-x86_64-debian-gcc | 0.3.1 | 5.72 | 54.20 | 59.92 | OK | |
| r-devel-linux-x86_64-fedora-clang | 0.3.1 | 56.00 | 81.47 | 137.47 | ERROR | |
| r-devel-linux-x86_64-fedora-gcc | 0.3.1 | 45.00 | 100.60 | 145.60 | ERROR | |
| r-devel-windows-x86_64 | 0.3.1 | 10.00 | 87.00 | 97.00 | OK | |
| r-patched-linux-x86_64 | 0.3.1 | 7.16 | 69.20 | 76.36 | OK | |
| r-release-linux-x86_64 | 0.3.1 | 7.52 | 69.93 | 77.45 | OK | |
| r-release-macos-arm64 | 0.3.1 | 4.00 | 50.00 | 54.00 | OK | |
| r-release-macos-x86_64 | 0.3.1 | 8.00 | 74.00 | 82.00 | OK | |
| r-release-windows-x86_64 | 0.3.1 | 10.00 | 84.00 | 94.00 | OK | |
| r-oldrel-macos-arm64 | 0.3.1 | 3.00 | 48.00 | 51.00 | OK | |
| r-oldrel-macos-x86_64 | 0.3.1 | 5.00 | 81.00 | 86.00 | OK | |
| r-oldrel-windows-x86_64 | 0.3.1 | 12.00 | 102.00 | 114.00 | OK |
Version: 0.3.1
Check: tests
Result: ERROR
Running ‘testOracle.R’
Running ‘testPostgres.R’ [5s/87s]
Running ‘testRedshift.R’
Running ‘testSqlServer.R’ [5s/83s]
Running the tests in ‘tests/testPostgres.R’ failed.
Complete output:
> library(testthat)
> options(dbms = "postgresql")
> test_check("CohortAlgebra")
Loading required package: CohortAlgebra
Loading required package: DatabaseConnector
Attaching package: 'dplyr'
The following object is masked from 'package:testthat':
matches
The following objects are masked from 'package:stats':
filter, lag
The following objects are masked from 'package:base':
intersect, setdiff, setequal, union
************* Testing on postgresql *************
Consider adding `DATABASECONNECTOR_JAR_FOLDER='/tmp/RtmpGfTxbd/working_dir/RtmpAg4bpu/file1b1fd144319b00/jdbcDrivers'` to /data/gannet/ripley/.Renviron and restarting R.
trying URL 'https://jdbc.postgresql.org/download/postgresql-42.7.3.jar'
Error in `FUN()`:
! In path: "/data/gannet/ripley/R/packages/tests-clang/CohortAlgebra.Rcheck/tests/testthat/setup.R"
Caused by error in `download.file()`:
! cannot open URL 'https://jdbc.postgresql.org/download/postgresql-42.7.3.jar'
Backtrace:
▆
1. ├─testthat::test_check("CohortAlgebra")
2. │ └─testthat::test_dir(...)
3. │ └─testthat:::test_files(...)
4. │ └─testthat:::test_files_serial(...)
5. │ └─testthat:::test_files_setup_state(...)
6. │ └─testthat::source_test_setup(".", env)
7. │ └─testthat::source_dir(path, "^setup.*\\.[rR]$", env = env, wrap = FALSE)
8. │ └─base::lapply(...)
9. │ └─testthat (local) FUN(X[[i]], ...)
10. │ └─testthat::source_file(path, env = env, chdir = chdir, wrap = wrap)
11. │ ├─base::withCallingHandlers(...)
12. │ └─base::eval(exprs, env)
13. │ └─base::eval(exprs, env)
14. │ └─DatabaseConnector::downloadJdbcDrivers("postgresql", pathToDriver = jdbcDriverFolder) at tests/testthat/setup.R:18:3
15. │ └─utils::download.file(...)
16. └─base::.handleSimpleError(...)
17. └─testthat (local) h(simpleError(msg, call))
18. └─rlang::abort(...)
Warning messages:
1: The folder location '/tmp/RtmpGfTxbd/working_dir/RtmpAg4bpu/file1b1fd144319b00/jdbcDrivers' does not exist. Attempting to create.
2: In download.file(url = paste0(driverSource$baseUrl, driverSource$fileName), :
URL 'https://jdbc.postgresql.org/download/postgresql-42.7.3.jar': Timeout of 60 seconds was reached
Execution halted
Running the tests in ‘tests/testSqlServer.R’ failed.
Complete output:
> library(testthat)
> options(dbms = "sql server")
> test_check("CohortAlgebra")
Loading required package: CohortAlgebra
Loading required package: DatabaseConnector
Attaching package: 'dplyr'
The following object is masked from 'package:testthat':
matches
The following objects are masked from 'package:stats':
filter, lag
The following objects are masked from 'package:base':
intersect, setdiff, setequal, union
************* Testing on sql server *************
Consider adding `DATABASECONNECTOR_JAR_FOLDER='/tmp/RtmpGfTxbd/working_dir/RtmpNjpeGn/file1b71105f70c891/jdbcDrivers'` to /data/gannet/ripley/.Renviron and restarting R.
trying URL 'https://jdbc.postgresql.org/download/postgresql-42.7.3.jar'
Error in `FUN()`:
! In path: "/data/gannet/ripley/R/packages/tests-clang/CohortAlgebra.Rcheck/tests/testthat/setup.R"
Caused by error in `download.file()`:
! cannot open URL 'https://jdbc.postgresql.org/download/postgresql-42.7.3.jar'
Backtrace:
▆
1. ├─testthat::test_check("CohortAlgebra")
2. │ └─testthat::test_dir(...)
3. │ └─testthat:::test_files(...)
4. │ └─testthat:::test_files_serial(...)
5. │ └─testthat:::test_files_setup_state(...)
6. │ └─testthat::source_test_setup(".", env)
7. │ └─testthat::source_dir(path, "^setup.*\\.[rR]$", env = env, wrap = FALSE)
8. │ └─base::lapply(...)
9. │ └─testthat (local) FUN(X[[i]], ...)
10. │ └─testthat::source_file(path, env = env, chdir = chdir, wrap = wrap)
11. │ ├─base::withCallingHandlers(...)
12. │ └─base::eval(exprs, env)
13. │ └─base::eval(exprs, env)
14. │ └─DatabaseConnector::downloadJdbcDrivers("postgresql", pathToDriver = jdbcDriverFolder) at tests/testthat/setup.R:18:3
15. │ └─utils::download.file(...)
16. └─base::.handleSimpleError(...)
17. └─testthat (local) h(simpleError(msg, call))
18. └─rlang::abort(...)
Warning messages:
1: The folder location '/tmp/RtmpGfTxbd/working_dir/RtmpNjpeGn/file1b71105f70c891/jdbcDrivers' does not exist. Attempting to create.
2: In download.file(url = paste0(driverSource$baseUrl, driverSource$fileName), :
URL 'https://jdbc.postgresql.org/download/postgresql-42.7.3.jar': Timeout of 60 seconds was reached
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 0.3.1
Check: tests
Result: ERROR
Running ‘testOracle.R’
Running ‘testPostgres.R’ [4s/69s]
Running ‘testRedshift.R’
Running ‘testSqlServer.R’ [4s/66s]
Running the tests in ‘tests/testPostgres.R’ failed.
Complete output:
> library(testthat)
> options(dbms = "postgresql")
> test_check("CohortAlgebra")
Loading required package: CohortAlgebra
Loading required package: DatabaseConnector
Attaching package: 'dplyr'
The following object is masked from 'package:testthat':
matches
The following objects are masked from 'package:stats':
filter, lag
The following objects are masked from 'package:base':
intersect, setdiff, setequal, union
************* Testing on postgresql *************
Consider adding `DATABASECONNECTOR_JAR_FOLDER='/tmp/Rtmp6TlhON/working_dir/RtmpuQYdmm/file1ae9515f471d45/jdbcDrivers'` to /data/gannet/ripley/.Renviron and restarting R.
trying URL 'https://jdbc.postgresql.org/download/postgresql-42.7.3.jar'
Error in `FUN()`:
! In path: "/data/gannet/ripley/R/packages/tests-devel/CohortAlgebra.Rcheck/tests/testthat/setup.R"
Caused by error in `download.file()`:
! cannot open URL 'https://jdbc.postgresql.org/download/postgresql-42.7.3.jar'
Backtrace:
▆
1. ├─testthat::test_check("CohortAlgebra")
2. │ └─testthat::test_dir(...)
3. │ └─testthat:::test_files(...)
4. │ └─testthat:::test_files_serial(...)
5. │ └─testthat:::test_files_setup_state(...)
6. │ └─testthat::source_test_setup(".", env)
7. │ └─testthat::source_dir(path, "^setup.*\\.[rR]$", env = env, wrap = FALSE)
8. │ └─base::lapply(...)
9. │ └─testthat (local) FUN(X[[i]], ...)
10. │ └─testthat::source_file(path, env = env, chdir = chdir, wrap = wrap)
11. │ ├─base::withCallingHandlers(...)
12. │ └─base::eval(exprs, env)
13. │ └─base::eval(exprs, env)
14. │ └─DatabaseConnector::downloadJdbcDrivers("postgresql", pathToDriver = jdbcDriverFolder) at tests/testthat/setup.R:18:3
15. │ └─utils::download.file(...)
16. └─base::.handleSimpleError(...)
17. └─testthat (local) h(simpleError(msg, call))
18. └─rlang::abort(...)
Warning messages:
1: The folder location '/tmp/Rtmp6TlhON/working_dir/RtmpuQYdmm/file1ae9515f471d45/jdbcDrivers' does not exist. Attempting to create.
2: In download.file(url = paste0(driverSource$baseUrl, driverSource$fileName), :
URL 'https://jdbc.postgresql.org/download/postgresql-42.7.3.jar': Timeout of 60 seconds was reached
Execution halted
Running the tests in ‘tests/testSqlServer.R’ failed.
Complete output:
> library(testthat)
> options(dbms = "sql server")
> test_check("CohortAlgebra")
Loading required package: CohortAlgebra
Loading required package: DatabaseConnector
Attaching package: 'dplyr'
The following object is masked from 'package:testthat':
matches
The following objects are masked from 'package:stats':
filter, lag
The following objects are masked from 'package:base':
intersect, setdiff, setequal, union
************* Testing on sql server *************
Consider adding `DATABASECONNECTOR_JAR_FOLDER='/tmp/Rtmp6TlhON/working_dir/RtmpMKXim7/file1b1b09611c2c2a/jdbcDrivers'` to /data/gannet/ripley/.Renviron and restarting R.
trying URL 'https://jdbc.postgresql.org/download/postgresql-42.7.3.jar'
Error in `FUN()`:
! In path: "/data/gannet/ripley/R/packages/tests-devel/CohortAlgebra.Rcheck/tests/testthat/setup.R"
Caused by error in `download.file()`:
! cannot open URL 'https://jdbc.postgresql.org/download/postgresql-42.7.3.jar'
Backtrace:
▆
1. ├─testthat::test_check("CohortAlgebra")
2. │ └─testthat::test_dir(...)
3. │ └─testthat:::test_files(...)
4. │ └─testthat:::test_files_serial(...)
5. │ └─testthat:::test_files_setup_state(...)
6. │ └─testthat::source_test_setup(".", env)
7. │ └─testthat::source_dir(path, "^setup.*\\.[rR]$", env = env, wrap = FALSE)
8. │ └─base::lapply(...)
9. │ └─testthat (local) FUN(X[[i]], ...)
10. │ └─testthat::source_file(path, env = env, chdir = chdir, wrap = wrap)
11. │ ├─base::withCallingHandlers(...)
12. │ └─base::eval(exprs, env)
13. │ └─base::eval(exprs, env)
14. │ └─DatabaseConnector::downloadJdbcDrivers("postgresql", pathToDriver = jdbcDriverFolder) at tests/testthat/setup.R:18:3
15. │ └─utils::download.file(...)
16. └─base::.handleSimpleError(...)
17. └─testthat (local) h(simpleError(msg, call))
18. └─rlang::abort(...)
Warning messages:
1: The folder location '/tmp/Rtmp6TlhON/working_dir/RtmpMKXim7/file1b1b09611c2c2a/jdbcDrivers' does not exist. Attempting to create.
2: In download.file(url = paste0(driverSource$baseUrl, driverSource$fileName), :
URL 'https://jdbc.postgresql.org/download/postgresql-42.7.3.jar': Timeout of 60 seconds was reached
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc