406542c72cacb62653c03522929d62b0 *DESCRIPTION
33e6f2c92b641965f41e12cbb1c0e893 *LICENSE
7ebd1fe88ceb4ed93f2afcd7c11afb49 *NAMESPACE
2f40cc998d5fead379ab905ec0184e02 *NEWS.md
61f106f57c6a76e997e0c2274b1cf7b8 *R/contactMatrixAgeSchool.R
a707d4413beea97a0b262e90e79203ca *R/contactMatrixPolymod.R
ad253bef2e901b131310171cec2e3f03 *R/contactMatrixPropPref.R
615dba6e8bb804685f94b252eaacd7ca *R/finalsize.R
ec482add189c2a4edc5053c3cfa4bad4 *R/getCensusData.R
c3affab0231c527282368140f8a5bcec *R/getFinalSizeAnalytic.R
69de2fc0723f3f9889d24abb3439cbd4 *R/getFinalSizeDist.R
75e47ca1782117bb2ecd63ba1d80863f *R/getFinalSizeDistEscape.R
3d4e41ffe3164424bc174f9b3a26c6b5 *R/getFinalSizeODE.R
dc313a9eecb481cd497f8992b22fee34 *R/getSizeAtTime.R
ac3c8d3c33b45471c3bb11a93adb1982 *R/odeSIR.R
987156643372bf3b6a9fbc26bc4a6889 *R/run.R
13c0633cee35e8a96350f7d1c7f86e93 *R/transmissionRates.R
1b066973f38d60b338400597d00a3a39 *R/vaxrepnum.R
712821e7e809f4efeb06cfb564a16bd9 *README.md
8ae81bf20f2e750c88484729eaec3c6c *build/vignette.rds
1b4e0b8e9a138448203f79a59562de43 *inst/CITATION
482315d614363f4cff6fa66025480536 *inst/app/app.R
843fbd135a9343d9a32c9ef292fccb52 *inst/app/server.R
b65a888a27994a79c08f004e8a2aa6ad *inst/app/ui.R
39110c2415e56036d2799069505a593a *inst/app/www/figs/logo.jpg
3df00e52cd64f3d52b60fe59934a102e *inst/app/www/figs/screenshot.PNG
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37963844b73ca03eba94738f78ed2dfa *inst/app/www/modelingMethodsAppendix.docx
409b8c13cdba1e17315e81b021e64089 *inst/doc/census_functions_demo.R
d0fa22634c9744c660ef13e840b9ee9c *inst/doc/census_functions_demo.Rmd
6051098d778e8562ee2cf78163d81f90 *inst/doc/census_functions_demo.html
f666398c72d0015858ed1cc081c433ef *inst/doc/contact_matrix_examples.R
b9796692193cc9fe4b975ac3c614e7a5 *inst/doc/contact_matrix_examples.Rmd
e72f5f50629fe42f89aec5c3fa5be1fa *inst/doc/contact_matrix_examples.html
d0f8dfcb3ad79f87d43e710a02f4fe51 *inst/doc/measles_agemodel.R
5b7cdc2193d38542ac7d36710f28806c *inst/doc/measles_agemodel.Rmd
7edf3f38cc3c7615778142fb8a4a6fa6 *inst/doc/measles_agemodel.html
942a374a1b510858019e8ca998e5d35b *inst/doc/run_model_on_command_line.R
95e4de121bd839a52acb6a59ea1576b0 *inst/doc/run_model_on_command_line.Rmd
4c64307ffee32eae045874b59f39c4ef *inst/doc/run_model_on_command_line.html
e8567ec6c24b0fb9167aa3869a91c7fd *inst/extdata/README.md
5f290de45ffc805803b6d5ecbdd44407 *inst/extdata/cc-est2024-syasex-49.csv
6810fe87b8fbd5253eb152d6c609c8ba *inst/extdata/centennial_park_az_2023.csv
704c0783e4271bb8c7aed8eb5ce3f009 *inst/extdata/colorado_city_az_2023.csv
fa4854f482d566f18e6b23c3894c505e *inst/extdata/hildale_ut_2023.csv
fdcbc4217fe4377fc8d7fcb745c31aee *man/aggregateByAgeGroups.Rd
a0e2768cd1f635eda534e36f8afd4906 *man/contactMatrixAgeSchool.Rd
833155c0fdca2474730e5aa78473967b *man/contactMatrixPolymod.Rd
7ca6812d6f786026fb52064b30273065 *man/contactMatrixPropPref.Rd
4ada71ae8414acc22cc6e4b2544ec007 *man/disaggregateCityAges.Rd
21173b3d26a91756ece731012a91ee89 *man/finalsize.Rd
548df1e85a9e4cc4b4a9ece38ce330eb *man/getCensusData.Rd
a1f5588ef56410385279b835f3b356b4 *man/getCensusDataPath.Rd
e5a5580c0f3ed8da7096e0160f38b28b *man/getCityData.Rd
e661164e1700c694ade30263d73bcf72 *man/getFinalSizeAnalytic.Rd
d39f06463871c7147f74be8221b8ac99 *man/getFinalSizeDist.Rd
efcfc5c2e9a256cd218d44cba8a81ac8 *man/getFinalSizeDistEscape.Rd
b3d1506bc1b2aedcbb5967d449ab888c *man/getFinalSizeODE.Rd
321319edc78986cfc157acf02f3f0a7f *man/getSizeAtTime.Rd
fe48db13a0a006d2fa0313ec9c2e7ee8 *man/getStateFIPS.Rd
d3f4f566c6eef78c6e5cf2c57923058c *man/listCounties.Rd
286e308d49a0effba7408682801c754e *man/odeSIR.Rd
5b4a93c33fe8f59fe110801c8d2e88d3 *man/processCensusDataBySex.Rd
253d4a721253a20c2f54c759dc3ed7f5 *man/processCensusDataTotal.Rd
0dddfa627f2d35b6b2c06e01f0596e53 *man/run_my_app.Rd
04d2a8d8412fe8510372949000db0477 *man/transmissionRates.Rd
5e12ce55c0d7e181305b81a32afa273f *man/vaxrepnum.Rd
fbcd0833d09278ff05f627ed4cfbbb3d *tests/testthat.R
4fb696997e4d19a264b0d8b98678219c *tests/testthat/test-contactMatrixAgeSchool.R
77ebeb7c264e89c14612e829d8348eeb *tests/testthat/test-contactMatrixPolymod.R
d3c13e413cc23e0b9312d65063677ff4 *tests/testthat/test-contactMatrixPropPref.R
0b7df9026b7c8a17f2f1a23dcf1ca9ff *tests/testthat/test-finalsize.R
6800647d751da34d3a121a6f35124885 *tests/testthat/test-getCensusData.R
b4d64bd7c408fc82dd5d0ae5705b32e3 *tests/testthat/test-getFinalSizeAnalytic.R
0d669f4473376dff783a8ff57432612f *tests/testthat/test-getFinalSizeDist.R
5a50838ddcea5ff413bb08e5d0e59441 *tests/testthat/test-getFinalSizeDistEscape.R
d0e25ac133cbc260d39bdd2439d4ffa2 *tests/testthat/test-getFinalSizeODE.R
43ceb0b3f2112d84c2ba45572210abd0 *tests/testthat/test-getSizeAtTime.R
925aae5c0cfe220fcb0c03cbafc4d962 *tests/testthat/test-odeSIR.R
11ae6d28eb0fa57cefb4afdff4447f04 *tests/testthat/test-transmissionRates.R
8490123e58103e3a01e0a1146342d3b7 *tests/testthat/test-vaxrepnum.R
d0fa22634c9744c660ef13e840b9ee9c *vignettes/census_functions_demo.Rmd
b9796692193cc9fe4b975ac3c614e7a5 *vignettes/contact_matrix_examples.Rmd
5b7cdc2193d38542ac7d36710f28806c *vignettes/measles_agemodel.Rmd
95e4de121bd839a52acb6a59ea1576b0 *vignettes/run_model_on_command_line.Rmd
