D.make                  Generate D Matrix
EM.MIM                  EM Algorithm for QTL MIM
EM.MIMv                 EM Algorithm for QTL MIM with Asymptotic
                        Variance-Covariance Matrix
EQF.permu               EQF Permutation
EQF.plot                EQF plot
IM.search               QTL search by IM
LOD.QTLdetect           QTL Detect by LOD
LRTthre                 LRT Threshold
MIM.points              QTL Short Distance Correction by MIM
MIM.search              QTL search by MIM
Q.make                  Generate Q Matrix
Qhot                    QTL Hotspot
Qhot.EQF                EQF Matrix Conversion
progeny                 Progeny Simulation
